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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs28578314 chr20:61471768 G/C 6.57E-5 473 14.97 16.9 15 KM Plot
THCA rs2857852 chr4:3043468 A/G 0.000113 466 15.8 15 16.8 KM Plot
THCA rs2857936 chr4:3062310 T/C 4.08E-5 479 16.37 15 16.87 KM Plot
THCA rs28579427 chr4:1062281 G/A 2.43E-5 485 15.9 15.3 9.85 KM Plot
THCA rs2857982 chr4:3358665 G/A 7.79E-6 481 11.78 15.13 16.95 KM Plot
THCA rs28581803 chr15:41326513 G/A 0.000135 488 15.17 16.3 17.03 KM Plot
THCA rs2860453 chr2:55270485 T/G 0.000167 480 17.73 15.97 12.37 KM Plot
THCA rs28605151 chr14:36168575 A/G 5.07E-6 490 15.97 16.07 8.33 KM Plot
THCA rs28613367 chr20:61471547 C/G 6.97E-5 473 15.07 16.72 15 KM Plot
THCA rs28621451 chr7:16471393 C/G 1.5E-9 475 15.63 16.67 17.77 KM Plot
THCA rs28622921 chr14:36253814 A/G 5.07E-6 490 15.93 16.35 8.33 KM Plot
THCA rs28630408 chr15:89054626 A/G 0.000147 480 16.48 15.17 15.9 KM Plot
THCA rs2863137 chr11:45025808 C/T 0.00013 481 12.1 19.48 14.92 KM Plot
THCA rs2863988 chr7:64243111 T/C 8.22E-9 474 12.6 14.67 16.6 KM Plot
THCA rs2865198 chr1:22348104 C/T 2.02E-5 482 14.77 17.78 12.43 KM Plot